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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869909.1_cds_XP_016433904.1_30016
CDS Infomation

[gene=LOC107760379] [db_xref=GeneID:107760379] [protein=ribosomal RNA small subunit methyltransferase H-like] [protein_id=XP_016433904.1] [location=complement(join(13068..13492,13681..13873,15006..15074,19001..19252,19588..20022))] [gbkey=CDS]
Sequence

ATGTGGTTTACAAGTTGGAATTCCACTACAGCAGCACCAATGGCAAGGTTAATCCGAAAC
ATTTTCTTTCACTCTTCCACCATTTCCCCACCGGTACCGCCGCCGCTCAAATTCCACCAC
CTCCGCCGTATCCACGCCGGCAACAGCTTATCTGCTTCCGCTTCAGTTCACAGTAAACCT
CGGAAAAACAAAGTAAAAAAGGTGGAAAAGACCAGTAATAGTAGCGTAATTAACCAAAAC
AAGCTTTCACAAGTGAAGCGGAGGACTCGGTCGGAGAAAGAGCTAGATGAGGAAACCTTC
CTGAAGCACTATGGAAATGACAACTCTGCCCCCCATGTCCCTGTCTTGCTCGGCGAAGTT
TTGGATGTTTTCGCCTCCGCCACTCTCCGCTCCTTCCTTGATTGTACCCTCGGTGCCGCC
GGACATTCCTCTGCTATAATTCAGGCTCATTCTGAAATGCAAGTATATGTTGGGCTTGAT
GTCGATCCCATTGCATATCAAATTGCTCAATCTCAGCTGAAGGGTATCCTACATAAGGAG
TCTTGTGACACGGCTTTTGCCTTGAGAGTGCATACCTTTTTGAAAAATTTTAAGGACGTC
AAGTCCGTGCTTAGTGAAGTTGCAGACGACCGGTTAGCTTGTGGTGTTGATGGGATCTTG
ATGGACTTGGGTATGTCATCTATGCAGGTAAATGATGCTGAAAGAGGTTTTAGCGTGCTG
AAGAATGGACCTCTTGACATGAGAATGAATCCAAAGGCAACTCTGAAAGCTGAAGACATA
CTGAATTCTTGGCCAGCTGATGAATTAGGACGAGTTCTGCGAGATTATGGAGAAGAAAGC
AATTGGTACTCTCTCCAAAACAGAATTGTTAAGACTCGTCTACATGGAGGGTTACATTCT
ACCAGTGAGCTGGTAGACCTTATTCAGAATTCAACTTCTAGGACTAAAGGAAGGCAAGGT
TGGATTAAGACAGCAACTAGAGTTTTTCAGGCTTTGCGAATAGCTGTTAATGATGAGCTC
AAGACACTGGATGATTCCATCCGTGCTTGTTTTGAGTCTCTCAGTTCTGGTGGAAGGCTT
GCCGTAATTTCATTCCATAGTTTGGAGGACAGGATAGTAAAACAGGCATTTCTCAATATT
ATGAACTGCAGCGAAGTTGATGGAGGTGGGATTGAAGATGAAGAAGGGAAGCGCTTATGT
GAGCTGAGGAAAATTAATCTTGATACTGTTAAAGAAGAAGCATGGATAAAACAGGTGATA
CAAGGTCAGAATGGAACTATCCTTACAAAGAGACCCATAACACCATCTGAAAAGGAGGAG
GCATTAAATCCTCGAAGTCGGAGTGCTAAACTAAGAGTGATTCAAAAAGCCTGA

Peptide Sequence

PEP ID

XP_016433904.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase H-like [Nicotiana tabacum]
Sequence

MWFTSWNSTTAAPMARLIRNIFFHSSTISPPVPPPLKFHHLRRIHAGNSLSASASVHSKP
RKNKVKKVEKTSNSSVINQNKLSQVKRRTRSEKELDEETFLKHYGNDNSAPHVPVLLGEV
LDVFASATLRSFLDCTLGAAGHSSAIIQAHSEMQVYVGLDVDPIAYQIAQSQLKGILHKE
SCDTAFALRVHTFLKNFKDVKSVLSEVADDRLACGVDGILMDLGMSSMQVNDAERGFSVL
KNGPLDMRMNPKATLKAEDILNSWPADELGRVLRDYGEESNWYSLQNRIVKTRLHGGLHS
TSELVDLIQNSTSRTKGRQGWIKTATRVFQALRIAVNDELKTLDDSIRACFESLSSGGRL
AVISFHSLEDRIVKQAFLNIMNCSEVDGGGIEDEEGKRLCELRKINLDTVKEEAWIKQVI
QGQNGTILTKRPITPSEKEEALNPRSRSAKLRVIQKA

Transcript Sequence

Gene sequence data has not been registered.